Difference between revisions of "SJ00087"

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(Created page with "Category:gene == Gene SJ18961 == * transcription-direction: ** negative * right-end-position: ** 332287 * left-end-position: ** 320241 * centisome-position: ** 49.99914...")
(Created page with "Category:gene == Gene SJ21324 == * transcription-direction: ** positive * right-end-position: ** 451234 * left-end-position: ** 435126 * centisome-position: ** 72.463875...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18961 ==
+
== Gene SJ21324 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 332287
+
** 451234
 
* left-end-position:
 
* left-end-position:
−
** 320241
+
** 435126
 
* centisome-position:
 
* centisome-position:
−
** 49.99914    
+
** 72.463875    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[HISTALDEHYD-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN1G-1435]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[HISTOLDEHYD-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN1G-1436]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11727]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8001]]
+
* [[RXN1G-1437]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1438]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1G-1439]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TREHALOSEPHOSPHA-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[HISTSYN-PWY]]
+
* [[PWYG-321]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''26''' reactions found over '''182''' reactions in the full pathway
−
* [[PWY-6634]]
+
* [[PWY-7900]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-881]]
−
{{#set: right-end-position=332287}}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=320241}}
+
* [[TREHALOSESYN-PWY]]
−
{{#set: centisome-position=49.99914   }}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[TRESYN-PWY]]
−
{{#set: nb reaction associated=4}}
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: nb pathway associated=2}}
+
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=451234}}
 +
{{#set: left-end-position=435126}}
 +
{{#set: centisome-position=72.463875   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=5}}

Revision as of 14:53, 5 January 2021

Gene SJ21324

  • transcription-direction:
    • positive
  • right-end-position:
    • 451234
  • left-end-position:
    • 435126
  • centisome-position:
    • 72.463875

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWYG-321
    • 26 reactions found over 182 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-881
    • 1 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • TRESYN-PWY
    • 2 reactions found over 2 reactions in the full pathway




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