Difference between revisions of "SJ14652"

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(Created page with "Category:gene == Gene SJ02128 == * transcription-direction: ** negative * right-end-position: ** 56457 * left-end-position: ** 45594 * centisome-position: ** 32.26021...")
(Created page with "Category:gene == Gene SJ05252 == * transcription-direction: ** positive * right-end-position: ** 336244 * left-end-position: ** 316760 * centisome-position: ** 63.504154...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02128 ==
+
== Gene SJ05252 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 56457
+
** 336244
 
* left-end-position:
 
* left-end-position:
−
** 45594
+
** 316760
 
* centisome-position:
 
* centisome-position:
−
** 32.26021    
+
** 63.504154    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[2.3.1.75-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RETINOL-O-FATTY-ACYLTRANSFERASE-RXN]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12547]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12639]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-9356]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4193]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5885]]
+
* [[PWY-7210]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5884]]
+
* [[PWY-7198]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[TRIGLSYN-PWY]]
+
* [[PWY-7184]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6873]]
+
* [[PWY-6545]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-282]]
+
{{#set: transcription-direction=positive}}
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=336244}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=316760}}
−
{{#set: right-end-position=56457}}
+
{{#set: centisome-position=63.504154   }}
−
{{#set: left-end-position=45594}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: centisome-position=32.26021   }}
+
{{#set: nb reaction associated=5}}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: nb pathway associated=4}}
−
{{#set: nb reaction associated=7}}
 
−
{{#set: nb pathway associated=5}}
 

Revision as of 14:53, 5 January 2021

Gene SJ05252

  • transcription-direction:
    • positive
  • right-end-position:
    • 336244
  • left-end-position:
    • 316760
  • centisome-position:
    • 63.504154

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14652&oldid=58385"