Difference between revisions of "SJ07766"
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(Created page with "Category:gene == Gene SJ19937 == * transcription-direction: ** negative * right-end-position: ** 208599 * left-end-position: ** 199351 * centisome-position: ** 91.66912...") |
(Created page with "Category:gene == Gene SJ15446 == * transcription-direction: ** positive * right-end-position: ** 80221 * left-end-position: ** 59008 * centisome-position: ** 19.963327...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ15446 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 80221 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 59008 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 19.963327 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[NITRATE-REDUCTASE-NADH-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[NITRATE-REDUCTASE-NADPH-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[NITRATE-REDUCTASE-NADPORNOPH-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | ** Category: [[orthology]] | |
− | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | *** source: [[ | + | * [[NITRATREDUCT-RXN]] |
− | * [[RXN | ||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-381]] |
− | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5675]] |
− | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
− | + | {{#set: transcription-direction=positive}} | |
− | + | {{#set: right-end-position=80221}} | |
− | + | {{#set: left-end-position=59008}} | |
− | + | {{#set: centisome-position=19.963327 }} | |
− | {{#set: transcription-direction= | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
− | {{#set: right-end-position= | + | {{#set: nb reaction associated=4}} |
− | {{#set: left-end-position= | + | {{#set: nb pathway associated=2}} |
− | {{#set: centisome-position= | ||
− | {{#set: organism associated=S. | ||
− | {{#set: nb reaction associated= | ||
− | {{#set: nb pathway associated= |
Revision as of 14:53, 5 January 2021
Contents
Gene SJ15446
- transcription-direction:
- positive
- right-end-position:
- 80221
- left-end-position:
- 59008
- centisome-position:
- 19.963327
Organism(s) associated with this gene
Reaction(s) associated
- NITRATE-REDUCTASE-NADH-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- NITRATE-REDUCTASE-NADPH-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- NITRATE-REDUCTASE-NADPORNOPH-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- NITRATREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-381
- 3 reactions found over 3 reactions in the full pathway
- PWY-5675
- 4 reactions found over 4 reactions in the full pathway