Difference between revisions of "RXN-4313-CPD-4205/WATER//CPD-15318/CPD-4209.35."

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(Created page with "Category:reaction == Reaction NITRITE-REDUCTASE-CYTOCHROME-RXN == * direction: ** left-to-right * common-name: ** nitrite reductase (no-forming) * ec-number: ** [http://en...")
(Created page with "Category:reaction == Reaction RIBOSYLPYRIMIDINE-NUCLEOSIDASE-RXN == * direction: ** left-to-right * common-name: ** ribosylpyrimidine nucleosidase * ec-number: ** [http://...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NITRITE-REDUCTASE-CYTOCHROME-RXN ==
+
== Reaction RIBOSYLPYRIMIDINE-NUCLEOSIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nitrite reductase (no-forming)
+
** ribosylpyrimidine nucleosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.2.1 ec-1.7.2.1]
+
** [http://enzyme.expasy.org/EC/3.2.2.8 ec-3.2.2.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[NITRITE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[Cytochromes-C-Oxidized]][c] '''+''' 1 [[NITRIC-OXIDE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[Pyrimidine-Nucleosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-Ribofuranose]][c] '''+''' 1 [[Pyrimidine-Bases]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15937]]
+
* Gene: [[SJ07903]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P303-PWY]], ammonia oxidation II (anaerobic):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6748]], nitrate reduction VII (denitrification):
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6523]], nitrite-dependent anaerobic methane oxidation:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7084]], nitrifier denitrification:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00783 R00783]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02172 R02172]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q06006 Q06006]
 
−
** [http://www.uniprot.org/uniprot/Q52519 Q52519]
 
−
** [http://www.uniprot.org/uniprot/P24474 P24474]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrite reductase (no-forming)}}
+
{{#set: common-name=ribosylpyrimidine nucleosidase}}
−
{{#set: ec-number=ec-1.7.2.1}}
+
{{#set: ec-number=ec-3.2.2.8}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:01, 5 January 2021

Reaction RIBOSYLPYRIMIDINE-NUCLEOSIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • ribosylpyrimidine nucleosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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