Difference between revisions of "MANNKIN-RXN-D-mannopyranose/ATP//MANNOSE-6P/ADP/PROTON.43."
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(Created page with "Category:reaction == Reaction RXN-5462 == * direction: ** left-to-right * common-name: ** gdp-man:man1glcnac2-pp-dolichol α-1,3-mannosyltransferase * ec-number: ** [...") |
(Created page with "Category:reaction == Reaction GLUC1PURIDYLTRANS-RXN == * direction: ** reversible * common-name: ** utp:glucose-1-phosphate uridylyltransferase * ec-number: ** [http://enz...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction GLUC1PURIDYLTRANS-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** utp:glucose-1-phosphate uridylyltransferase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.7.7.64 ec-2.7.7.64] |
+ | ** [http://enzyme.expasy.org/EC/2.7.7.9 ec-2.7.7.9] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[GLC-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[CPD-12575]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ06954]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08662]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05850]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ10502]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ18341]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): |
− | ** ''' | + | ** '''6''' reactions found over '''16''' reactions in the full pathway |
+ | * [[PWY-7238]], sucrose biosynthesis II: | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6527]], stachyose degradation: | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-3801]], sucrose degradation II (sucrose synthase): | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7343]], UDP-α-D-glucose biosynthesis I: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19892 19892] | ||
+ | * PIR: | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A40650 A40650] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41382 A41382] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56146 A56146] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64250 A64250] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64970 A64970] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A75096 A75096] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D49349 D49349] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D69184 D69184] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70601 D70601] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E64466 E64466] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E71913 E71913] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F59102 F59102] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64600 F64600] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F81300 F81300] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64095 G64095] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G70125 G70125] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70446 H70446] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC2265 JC2265] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4785 JC4785] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4985 JC4985] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0277 JX0277] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S15298 S15298] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S30007 S30007] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S31431 S31431] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S35692 S35692] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41533 S41533] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62599 S62599] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S73501 S73501] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78541 S78541] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T42521 T42521] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44841 T44841] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45453 T45453] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNDOU XNDOU] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNPOU XNPOU] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q05852 Q05852] | ||
+ | ** [http://www.uniprot.org/uniprot/P27897 P27897] | ||
+ | ** [http://www.uniprot.org/uniprot/Q48447 Q48447] | ||
+ | ** [http://www.uniprot.org/uniprot/P47691 P47691] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AAB6 P0AAB6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UZI7 Q9UZI7] | ||
+ | ** [http://www.uniprot.org/uniprot/P33696 P33696] | ||
+ | ** [http://www.uniprot.org/uniprot/O26731 O26731] | ||
+ | ** [http://www.uniprot.org/uniprot/O05576 O05576] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58730 Q58730] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLI8 Q9ZLI8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X364 Q9X364] | ||
+ | ** [http://www.uniprot.org/uniprot/O25363 O25363] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PMD3 Q9PMD3] | ||
+ | ** [http://www.uniprot.org/uniprot/P44878 P44878] | ||
+ | ** [http://www.uniprot.org/uniprot/O51225 O51225] | ||
+ | ** [http://www.uniprot.org/uniprot/O67602 O67602] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AEP3 P0AEP3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43772 Q43772] | ||
+ | ** [http://www.uniprot.org/uniprot/P74969 P74969] | ||
+ | ** [http://www.uniprot.org/uniprot/Q07130 Q07130] | ||
+ | ** [http://www.uniprot.org/uniprot/P32861 P32861] | ||
+ | ** [http://www.uniprot.org/uniprot/P19595 P19595] | ||
+ | ** [http://www.uniprot.org/uniprot/Q07131 Q07131] | ||
+ | ** [http://www.uniprot.org/uniprot/P37776 P37776] | ||
+ | ** [http://www.uniprot.org/uniprot/P75124 P75124] | ||
+ | ** [http://www.uniprot.org/uniprot/Q46768 Q46768] | ||
+ | ** [http://www.uniprot.org/uniprot/P78811 P78811] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RMC3 Q9RMC3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z5G1 Q9Z5G1] | ||
+ | ** [http://www.uniprot.org/uniprot/P08800 P08800] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00289 R00289] |
− | + | </div> | |
− | + | {{#set: direction=reversible}} | |
− | {{#set: direction= | + | {{#set: common-name=utp:glucose-1-phosphate uridylyltransferase}} |
− | {{#set: common-name= | + | {{#set: ec-number=ec-2.7.7.9|ec-2.7.7.64}} |
− | {{#set: ec-number=ec-2. | + | {{#set: nb gene associated=5}} |
− | {{#set: nb gene associated= | + | {{#set: nb pathway associated=5}} |
− | {{#set: nb pathway associated= | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
− | {{#set: reconstruction tool=pantograph | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:02, 5 January 2021
Contents
Reaction GLUC1PURIDYLTRANS-RXN
- direction:
- reversible
- common-name:
- utp:glucose-1-phosphate uridylyltransferase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ06954
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08662
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ05850
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ10502
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ18341
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus):
- 6 reactions found over 16 reactions in the full pathway
- PWY-7238, sucrose biosynthesis II:
- 5 reactions found over 8 reactions in the full pathway
- PWY-6527, stachyose degradation:
- 7 reactions found over 7 reactions in the full pathway
- PWY-3801, sucrose degradation II (sucrose synthase):
- 4 reactions found over 5 reactions in the full pathway
- PWY-7343, UDP-α-D-glucose biosynthesis I:
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- RHEA:
- PIR:
- UNIPROT:
- LIGAND-RXN: