Difference between revisions of "SJ22386"
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(Created page with "Category:gene == Gene SJ08441 == * transcription-direction: ** negative * right-end-position: ** 39029 * left-end-position: ** 19923 * centisome-position: ** 37.531082...") |
(Created page with "Category:gene == Gene SJ02143 == * transcription-direction: ** negative * right-end-position: ** 67337 * left-end-position: ** 37275 * centisome-position: ** 26.438046...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ02143 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 67337 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 37275 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 26.438046 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[KETOGLUTREDUCT-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[PGLYCDEHYDROG-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[PSERTRANSAM-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[PSERTRANSAMPYR-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-16701]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | </div> | |
− | |||
− | |||
− | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[P162-PWY]] |
− | ** ''' | + | ** '''7''' reactions found over '''11''' reactions in the full pathway |
+ | * [[SERSYN-PWY]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PYRIDOXSYN-PWY]] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=67337}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=37275}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=26.438046 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 15:15, 5 January 2021
Contents
Gene SJ02143
- transcription-direction:
- negative
- right-end-position:
- 67337
- left-end-position:
- 37275
- centisome-position:
- 26.438046
Organism(s) associated with this gene
Reaction(s) associated
- KETOGLUTREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PGLYCDEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PSERTRANSAM-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- PSERTRANSAMPYR-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-16701
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- P162-PWY
- 7 reactions found over 11 reactions in the full pathway
- SERSYN-PWY
- 3 reactions found over 3 reactions in the full pathway
- PYRIDOXSYN-PWY
- 3 reactions found over 7 reactions in the full pathway