Difference between revisions of "SJ10180"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ08382 == * transcription-direction: ** positive * right-end-position: ** 387344 * left-end-position: ** 381288 * centisome-position: ** 86.40187...") |
(Created page with "Category:gene == Gene SJ00821 == * transcription-direction: ** negative * right-end-position: ** 395052 * left-end-position: ** 380855 * centisome-position: ** 68.145386...") |
||
Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ00821 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 395052 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 380855 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 68.145386 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[CHORISMATE-SYNTHASE-RXN]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6163]] |
− | + | ** '''6''' reactions found over '''5''' reactions in the full pathway | |
− | + | {{#set: transcription-direction=negative}} | |
− | ** '''6''' reactions found over ''' | + | {{#set: right-end-position=395052}} |
− | + | {{#set: left-end-position=380855}} | |
− | + | {{#set: centisome-position=68.145386 }} | |
− | |||
− | |||
− | {{#set: transcription-direction= | ||
− | {{#set: right-end-position= | ||
− | {{#set: left-end-position= | ||
− | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
Revision as of 15:20, 5 January 2021
Contents
Gene SJ00821
- transcription-direction:
- negative
- right-end-position:
- 395052
- left-end-position:
- 380855
- centisome-position:
- 68.145386
Organism(s) associated with this gene
Reaction(s) associated
- CHORISMATE-SYNTHASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6163
- 6 reactions found over 5 reactions in the full pathway