Difference between revisions of "SJ13415"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ02182 == * transcription-direction: ** positive * right-end-position: ** 369860 * left-end-position: ** 340317 * centisome-position: ** 62.615246...")
(Created page with "Category:gene == Gene SJ12139 == * transcription-direction: ** negative * right-end-position: ** 322676 * left-end-position: ** 313944 * centisome-position: ** 86.83617...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ02182 ==
+
== Gene SJ12139 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 369860
+
** 322676
 
* left-end-position:
 
* left-end-position:
** 340317
+
** 313944
 
* centisome-position:
 
* centisome-position:
** 62.615246    
+
** 86.83617    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RIBOFLAVINSYNREDUC-RXN]]
+
* [[ACETOACETATE--COA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-10057]]
+
{{#set: transcription-direction=negative}}
** Category: [[annotation]]
+
{{#set: right-end-position=322676}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=313944}}
* [[RXN-14171]]
+
{{#set: centisome-position=86.83617   }}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[RIBOSYN2-PWY]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6168]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6167]]
 
** '''5''' reactions found over '''10''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=369860}}
 
{{#set: left-end-position=340317}}
 
{{#set: centisome-position=62.615246   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=3}}
 

Revision as of 15:22, 5 January 2021

Gene SJ12139

  • transcription-direction:
    • negative
  • right-end-position:
    • 322676
  • left-end-position:
    • 313944
  • centisome-position:
    • 86.83617

Organism(s) associated with this gene

Reaction(s) associated