Difference between revisions of "SJ05476"

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(Created page with "Category:gene == Gene SJ10780 == * transcription-direction: ** negative * right-end-position: ** 79981 * left-end-position: ** 73410 * centisome-position: ** 19.083742...")
(Created page with "Category:gene == Gene SJ16475 == * transcription-direction: ** positive * right-end-position: ** 49104 * left-end-position: ** 40372 * centisome-position: ** 14.320985...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10780 ==
+
== Gene SJ16475 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 79981
+
** 49104
 
* left-end-position:
 
* left-end-position:
−
** 73410
+
** 40372
 
* centisome-position:
 
* centisome-position:
−
** 19.083742    
+
** 14.320985    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PHOSGLYPHOS-RXN]]
+
* [[1.1.1.8-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLYC3PDEHYDROGBIOSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 18: Line 24:
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6118]]
−
* [[PWY66-399]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7385]]
−
* [[GLUCONEO-PWY]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7411]]
−
* [[P124-PWY]]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-7902]]
−
* [[CALVIN-PWY]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-5981]]
−
* [[P185-PWY]]
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY0-1319]]
−
* [[P122-PWY]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-5667]]
−
* [[PWY-5484]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-1042]]
+
{{#set: right-end-position=49104}}
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
{{#set: left-end-position=40372}}
−
* [[GLYCOLYSIS]]
+
{{#set: centisome-position=14.320985   }}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=79981}}
 
−
{{#set: left-end-position=73410}}
 
−
{{#set: centisome-position=19.083742   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=7}}

Revision as of 15:23, 5 January 2021

Gene SJ16475

  • transcription-direction:
    • positive
  • right-end-position:
    • 49104
  • left-end-position:
    • 40372
  • centisome-position:
    • 14.320985

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6118
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7411
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7902
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway




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