Difference between revisions of "RXN-16025"
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(Created page with "Category:reaction == Reaction 1.14.13.78-RXN == * direction: ** left-to-right * common-name: ** ent-kaurene 19-hydroxylase == Reaction formula == * 1 CPD1F-128[c] '''+...") |
(Created page with "Category:reaction == Reaction RXN-11856 == * direction: ** left-to-right * common-name: ** trna (cytosine34-c5)-methyltransferase * ec-number: ** [http://enzyme.expasy.org...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-11856 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** trna (cytosine34-c5)-methyltransferase |
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.1.1.203 ec-2.1.1.203] | ||
| + | ** [http://enzyme.expasy.org/EC/2.1.1.202 ec-2.1.1.202] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Cytosine-34-tRNA-Precursors]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[5-METHYLCYTOSINE-34-TRNA-PRECURSORS]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ20083]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
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| − | |||
| − | |||
| − | |||
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== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6829]], tRNA methylation (yeast): |
| − | ** ''' | + | ** '''11''' reactions found over '''15''' reactions in the full pathway |
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42941 42941] |
| − | |||
| − | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=trna (cytosine34-c5)-methyltransferase}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.1.1.202|ec-2.1.1.203}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=1}} |
| − | {{#set: reconstruction category= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction category=annotation}} |
| + | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 15:33, 5 January 2021
Contents
Reaction RXN-11856
- direction:
- left-to-right
- common-name:
- trna (cytosine34-c5)-methyltransferase
- ec-number:
Reaction formula
- 1 Cytosine-34-tRNA-Precursors[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 5-METHYLCYTOSINE-34-TRNA-PRECURSORS[c] + 1 ADENOSYL-HOMO-CYS[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ20083
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6829, tRNA methylation (yeast):
- 11 reactions found over 15 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
