Difference between revisions of "SJ11158"

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(Created page with "Category:gene == Gene SJ15982 == * transcription-direction: ** negative * right-end-position: ** 163779 * left-end-position: ** 154241 * centisome-position: ** 53.471798...")
(Created page with "Category:gene == Gene SJ18392 == * transcription-direction: ** negative * right-end-position: ** 108445 * left-end-position: ** 74680 * centisome-position: ** 30.214268...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15982 ==
+
== Gene SJ18392 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 163779
+
** 108445
 
* left-end-position:
 
* left-end-position:
−
** 154241
+
** 74680
 
* centisome-position:
 
* centisome-position:
−
** 53.471798    
+
** 30.214268    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.3.16-RXN]]
−
* [[2.7.10.1-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.7.11.24-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.7.12.1-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN]]
−
* [[2.7.12.2-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PROTEIN-KINASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14906]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16317]]
+
* [[RXN-10958]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
+
== Pathway(s) associated ==
 +
* [[PWY-6368]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6580]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6367]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=163779}}
+
{{#set: right-end-position=108445}}
−
{{#set: left-end-position=154241}}
+
{{#set: left-end-position=74680}}
−
{{#set: centisome-position=53.471798   }}
+
{{#set: centisome-position=30.214268   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=3}}

Revision as of 12:57, 14 January 2021

Gene SJ18392

  • transcription-direction:
    • negative
  • right-end-position:
    • 108445
  • left-end-position:
    • 74680
  • centisome-position:
    • 30.214268

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6580
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6367
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11158&oldid=79558"