Difference between revisions of "SJ00027"

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(Created page with "Category:gene == Gene SJ10455 == * transcription-direction: ** negative * right-end-position: ** 320852 * left-end-position: ** 305000 * centisome-position: ** 78.03864...")
(Created page with "Category:gene == Gene SJ11977 == * transcription-direction: ** positive * right-end-position: ** 171566 * left-end-position: ** 154883 * centisome-position: ** 42.712914...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ10455 ==
+
== Gene SJ11977 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 320852
+
** 171566
 
* left-end-position:
 
* left-end-position:
** 305000
+
** 154883
 
* centisome-position:
 
* centisome-position:
** 78.03864    
+
** 42.712914    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[METHIONINE--TRNA-LIGASE-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-16165]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=positive}}
== Pathway(s) associated ==
+
{{#set: right-end-position=171566}}
* [[TRNA-CHARGING-PWY]]
+
{{#set: left-end-position=154883}}
** '''21''' reactions found over '''21''' reactions in the full pathway
+
{{#set: centisome-position=42.712914   }}
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=320852}}
 
{{#set: left-end-position=305000}}
 
{{#set: centisome-position=78.03864   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=1}}
 

Revision as of 12:58, 14 January 2021

Gene SJ11977

  • transcription-direction:
    • positive
  • right-end-position:
    • 171566
  • left-end-position:
    • 154883
  • centisome-position:
    • 42.712914

Organism(s) associated with this gene

Reaction(s) associated