Difference between revisions of "SJ21563"

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(Created page with "Category:gene == Gene SJ16883 == * transcription-direction: ** positive * right-end-position: ** 252893 * left-end-position: ** 246796 * centisome-position: ** 89.51484...")
(Created page with "Category:gene == Gene SJ05085 == * transcription-direction: ** negative * right-end-position: ** 70944 * left-end-position: ** 41100 * centisome-position: ** 42.424496...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ16883 ==
+
== Gene SJ05085 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 252893
+
** 70944
 
* left-end-position:
 
* left-end-position:
** 246796
+
** 41100
 
* centisome-position:
 
* centisome-position:
** 89.51484    
+
** 42.424496    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ARGININE--TRNA-LIGASE-RXN]]
* [[GSHTRAN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[GST-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13673]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-15680]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6842]]
+
* [[TRNA-CHARGING-PWY]]
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
* [[PWY-4061]]
+
{{#set: transcription-direction=negative}}
** '''4''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=70944}}
* [[PWY66-374]]
+
{{#set: left-end-position=41100}}
** '''2''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=42.424496   }}
* [[PWY-7112]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7533]]
 
** '''3''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=252893}}
 
{{#set: left-end-position=246796}}
 
{{#set: centisome-position=89.51484   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Revision as of 12:59, 14 January 2021

Gene SJ05085

  • transcription-direction:
    • negative
  • right-end-position:
    • 70944
  • left-end-position:
    • 41100
  • centisome-position:
    • 42.424496

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated