Difference between revisions of "SJ11651"

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(Created page with "Category:gene == Gene SJ04905 == * transcription-direction: ** positive * right-end-position: ** 56193 * left-end-position: ** 52834 * centisome-position: ** 53.687634...")
(Created page with "Category:gene == Gene SJ00800 == * transcription-direction: ** negative * right-end-position: ** 157112 * left-end-position: ** 147025 * centisome-position: ** 91.09581...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04905 ==
+
== Gene SJ00800 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 56193
+
** 157112
 
* left-end-position:
 
* left-end-position:
−
** 52834
+
** 147025
 
* centisome-position:
 
* centisome-position:
−
** 53.687634    
+
** 91.09581    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RIBULP3EPIM-RXN]]
+
* [[PEROXID-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-1861]]
+
* [[PWY-7214]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[P21-PWY]]
+
* [[PWY-7445]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[NONOXIPENT-PWY]]
+
* [[PWY-5466]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5723]]
+
* [[PWY-6824]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[P124-PWY]]
+
* [[PWY-5469]]
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[CALVIN-PWY]]
+
* [[PWY-5461]]
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P122-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
{{#set: right-end-position=157112}}
−
* [[P185-PWY]]
+
{{#set: left-end-position=147025}}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: centisome-position=91.09581   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=56193}}
 
−
{{#set: left-end-position=52834}}
 
−
{{#set: centisome-position=53.687634   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=6}}

Revision as of 13:00, 14 January 2021

Gene SJ00800

  • transcription-direction:
    • negative
  • right-end-position:
    • 157112
  • left-end-position:
    • 147025
  • centisome-position:
    • 91.09581

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11651&oldid=81021"