Difference between revisions of "SJ07285"
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(Created page with "Category:gene == Gene SJ00628 == * transcription-direction: ** positive * right-end-position: ** 29681 * left-end-position: ** 19418 * centisome-position: ** 11.803968...") |
(Created page with "Category:gene == Gene SJ12224 == * transcription-direction: ** negative * right-end-position: ** 698989 * left-end-position: ** 690537 * centisome-position: ** 90.27831...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ12224 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 698989 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 690537 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 90.27831 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[FRUCTOKINASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | * [[GLUCOKIN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[HEXOKINASE-RXN]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[PWY-3801]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-621]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[P122-PWY]] | ||
+ | ** '''16''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-4101]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5384]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[SUCROSEUTIL2-PWY]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6531]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[SUCUTIL-PWY]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-2723]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY0-1182]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5661]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[GLYCOCAT-PWY]] | ||
+ | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7238]] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[P124-PWY]] | ||
+ | ** '''12''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[GLUCOSE1PMETAB-PWY]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7385]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-2722]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[TREDEGLOW-PWY]] | ||
** '''1''' reactions found over '''2''' reactions in the full pathway | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
− | * [[ | + | * [[ANAGLYCOLYSIS-PWY]] |
− | + | ** '''10''' reactions found over '''11''' reactions in the full pathway | |
− | + | * [[PWY-5514]] | |
− | ** | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
− | + | </div> | |
− | + | {{#set: transcription-direction=negative}} | |
− | * [[PWY- | + | {{#set: right-end-position=698989}} |
− | ** ''' | + | {{#set: left-end-position=690537}} |
− | + | {{#set: centisome-position=90.27831 }} | |
− | |||
− | {{#set: transcription-direction= | ||
− | {{#set: right-end-position= | ||
− | {{#set: left-end-position= | ||
− | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=20}} |
Revision as of 13:06, 14 January 2021
Contents
Gene SJ12224
- transcription-direction:
- negative
- right-end-position:
- 698989
- left-end-position:
- 690537
- centisome-position:
- 90.27831
Organism(s) associated with this gene
Reaction(s) associated
- FRUCTOKINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUCOKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HEXOKINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-3801
- 4 reactions found over 5 reactions in the full pathway
- PWY-621
- 3 reactions found over 4 reactions in the full pathway
- P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- PWY-4101
- 2 reactions found over 3 reactions in the full pathway
- PWY-5384
- 3 reactions found over 4 reactions in the full pathway
- SUCROSEUTIL2-PWY
- 1 reactions found over 4 reactions in the full pathway
- PWY-6531
- 4 reactions found over 5 reactions in the full pathway
- SUCUTIL-PWY
- 1 reactions found over 3 reactions in the full pathway
- PWY-2723
- 2 reactions found over 3 reactions in the full pathway
- PWY0-1182
- 2 reactions found over 2 reactions in the full pathway
- PWY-5661
- 2 reactions found over 3 reactions in the full pathway
- GLYCOCAT-PWY
- 6 reactions found over 8 reactions in the full pathway
- PWY-7238
- 5 reactions found over 8 reactions in the full pathway
- P124-PWY
- 12 reactions found over 15 reactions in the full pathway
- GLUCOSE1PMETAB-PWY
- 3 reactions found over 5 reactions in the full pathway
- PWY-7385
- 7 reactions found over 9 reactions in the full pathway
- PWY-2722
- 1 reactions found over 3 reactions in the full pathway
- TREDEGLOW-PWY
- 1 reactions found over 2 reactions in the full pathway
- ANAGLYCOLYSIS-PWY
- 10 reactions found over 11 reactions in the full pathway
- PWY-5514
- 5 reactions found over 7 reactions in the full pathway