Difference between revisions of "RXN-7954"

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(Created page with "Category:reaction == Reaction GUANINE-DEAMINASE-RXN == * direction: ** left-to-right * common-name: ** guanine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4...")
(Created page with "Category:reaction == Reaction ExchangeSeed-PROTON == * direction: ** reversible == Reaction formula == * 1.0 PROTON[C-BOUNDARY] '''<=>''' 1.0 PROTON[e] == Gene(s)...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction GUANINE-DEAMINASE-RXN ==
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== Reaction ExchangeSeed-PROTON ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
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* common-name:
 
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** guanine deaminase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/3.5.4.3 ec-3.5.4.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[GUANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHINE]][c]
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* 1.0 [[PROTON]][C-BOUNDARY] '''<=>''' 1.0 [[PROTON]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ08613]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
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** '''10''' reactions found over '''24''' reactions in the full pathway
 
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
 
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** '''6''' reactions found over '''17''' reactions in the full pathway
 
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* [[PWY-6606]], guanosine nucleotides degradation II:
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-6608]], guanosine nucleotides degradation III:
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14666 14666]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
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{{#set: reconstruction category=manual}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction tool=curation}}
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{{#set: common-name=guanine deaminase}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: ec-number=ec-3.5.4.3}}
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{{#set: reconstruction source=import_from_medium}}
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Revision as of 13:14, 14 January 2021

Reaction ExchangeSeed-PROTON

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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