Difference between revisions of "RXN-7908"

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(Created page with "Category:reaction == Reaction FORMATETHFLIG-RXN == * direction: ** reversible * common-name: ** formate:tetrahydropteroylpolyglutamate ligase ** formate-tetrahydrofolate l...")
(Created page with "Category:reaction == Reaction RXN0-5514 == * direction: ** left-to-right * common-name: ** 1-acylglycerol-3-phosphate o-acyltransferase ** acyl-coa:1-acyl-sn-glycerol-3-ph...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FORMATETHFLIG-RXN ==
+
== Reaction RXN0-5514 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** formate:tetrahydropteroylpolyglutamate ligase
+
** 1-acylglycerol-3-phosphate o-acyltransferase
−
** formate-tetrahydrofolate ligase
+
** acyl-coa:1-acyl-sn-glycerol-3-phosphate 2-o-acyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.3 ec-6.3.4.3]
+
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[Saturated-2-Lysophosphatidates]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c] '''=>''' 1 [[2-3-4-Saturated-L-Phosphatidates]][c] '''+''' 1 [[ACP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12991]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ10647]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15136]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09888]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ01857]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08831]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13501]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13801]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ07523]]
+
* Gene: [[SJ13643]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18009]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20565]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2161]], folate polyglutamylation:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-2201]], folate transformations I:
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-3841]], folate transformations II (plants):
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20224 20224]
+
{{#set: common-name=1-acylglycerol-3-phosphate o-acyltransferase|acyl-coa:1-acyl-sn-glycerol-3-phosphate 2-o-acyltransferase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-2.3.1.51}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943]
+
{{#set: nb gene associated=10}}
−
* UNIPROT:
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P09440 P09440]
 
−
** [http://www.uniprot.org/uniprot/P13419 P13419]
 
−
** [http://www.uniprot.org/uniprot/P07245 P07245]
 
−
** [http://www.uniprot.org/uniprot/P11586 P11586]
 
−
** [http://www.uniprot.org/uniprot/P21164 P21164]
 
−
** [http://www.uniprot.org/uniprot/P28723 P28723]
 
−
** [http://www.uniprot.org/uniprot/Q9JVY8 Q9JVY8]
 
−
** [http://www.uniprot.org/uniprot/Q9CH07 Q9CH07]
 
−
** [http://www.uniprot.org/uniprot/Q07064 Q07064]
 
−
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=formate-tetrahydrofolate ligase|formate:tetrahydropteroylpolyglutamate ligase}}
 
−
{{#set: ec-number=ec-6.3.4.3}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=5}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:14, 14 January 2021

Reaction RXN0-5514

  • direction:
    • left-to-right
  • common-name:
    • 1-acylglycerol-3-phosphate o-acyltransferase
    • acyl-coa:1-acyl-sn-glycerol-3-phosphate 2-o-acyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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