Difference between revisions of "RXN-12726"

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(Created page with "Category:reaction == Reaction RXN-1101 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.44 ec-1.2.1.44] == Reaction formula == * 1 NAD...")
(Created page with "Category:reaction == Reaction 1.1.1.211-RXN == * direction: ** reversible * common-name: ** long-chain-3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expas...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1101 ==
+
== Reaction 1.1.1.211-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** long-chain-3-hydroxyacyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.44 ec-1.2.1.44]
+
** [http://enzyme.expasy.org/EC/1.1.1.211 ec-1.1.1.211]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[COUMARALDEHYDE]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[Long-Chain-3S-Hydroxyacyl-CoAs]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[Long-Chain-oxoacyl-CoAs]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06064]]
+
* Gene: [[SJ16470]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ12213]]
+
* Gene: [[SJ21390]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21972]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-361]], phenylpropanoid biosynthesis:
 
−
** '''7''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01615 R01615]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: ec-number=ec-1.2.1.44}}
+
** [http://www.uniprot.org/uniprot/Q64428 Q64428]
−
{{#set: nb gene associated=3}}
+
** [http://www.uniprot.org/uniprot/P40939 P40939]
−
{{#set: nb pathway associated=1}}
+
{{#set: direction=reversible}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common-name=long-chain-3-hydroxyacyl-coa dehydrogenase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec-number=ec-1.1.1.211}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:14, 14 January 2021

Reaction 1.1.1.211-RXN

  • direction:
    • reversible
  • common-name:
    • long-chain-3-hydroxyacyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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