Difference between revisions of "PEROXID-RXN"

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(Created page with "Category:reaction == Reaction RXN-11989 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.13.11.59 ec-1.13.11.59] == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction RXN0-985 == * direction: ** left-to-right * common-name: ** n3-methylcytosine demethylase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11989 ==
+
== Reaction RXN0-985 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** n3-methylcytosine demethylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.13.11.59 ec-1.13.11.59]
+
** [http://enzyme.expasy.org/EC/1.14.11.33 ec-1.14.11.33]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-12935]][c] '''+''' 1 [[PRENAL]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N3-METHYLCYTOSINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CYTOSINE]][c] '''+''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09694]]
+
* Gene: [[SJ10887]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ18790]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ17463]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ10882]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6681]], neurosporaxanthin biosynthesis:
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-1.13.11.59}}
+
{{#set: common-name=n3-methylcytosine demethylase}}
{{#set: nb gene associated=4}}
+
{{#set: ec-number=ec-1.14.11.33}}
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=1}}
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:14, 14 January 2021

Reaction RXN0-985

  • direction:
    • left-to-right
  • common-name:
    • n3-methylcytosine demethylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links