Difference between revisions of "RXN-16619"

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(Created page with "Category:reaction == Reaction PYRROLINECARBREDUCT-RXN == * direction: ** left-to-right * common-name: ** pyrroline-5-carboxylate reductase * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction THIOSULFATE-SULFURTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** thiosulfate sulfurtransferase * ec-number: ** [http://en...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PYRROLINECARBREDUCT-RXN ==
+
== Reaction THIOSULFATE-SULFURTRANSFERASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** pyrroline-5-carboxylate reductase
+
** thiosulfate sulfurtransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.1.2 ec-1.5.1.2]
+
** [http://enzyme.expasy.org/EC/2.8.1.1 ec-2.8.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PRO]][c]
+
* 1 [[HCN]][c] '''+''' 1 [[S2O3]][c] '''=>''' 1 [[HSCN]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SO3]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22264]]
+
* Gene: [[SJ00307]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15062]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ11815]]
+
* Gene: [[SJ06337]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16682]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12357]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3341]], L-proline biosynthesis III (from L-ornithine):
+
* [[PWY-5350]], thiosulfate disproportionation IV (rhodanese):
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PROSYN-PWY]], L-proline biosynthesis I (from L-glutamate):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction):
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4981]], L-proline biosynthesis II (from arginine):
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14107 14107]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16882 16882]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01931 R01931]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P32322 P32322]
+
** [http://www.uniprot.org/uniprot/P25324 P25324]
−
** [http://www.uniprot.org/uniprot/P27771 P27771]
+
** [http://www.uniprot.org/uniprot/P52196 P52196]
−
** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
+
** [http://www.uniprot.org/uniprot/Q16762 Q16762]
−
** [http://www.uniprot.org/uniprot/P14383 P14383]
+
** [http://www.uniprot.org/uniprot/P00586 P00586]
−
** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
+
** [http://www.uniprot.org/uniprot/P25325 P25325]
−
** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
+
** [http://www.uniprot.org/uniprot/P24329 P24329]
−
** [http://www.uniprot.org/uniprot/Q12740 Q12740]
+
** [http://www.uniprot.org/uniprot/P52197 P52197]
−
** [http://www.uniprot.org/uniprot/P22008 P22008]
+
** [http://www.uniprot.org/uniprot/O64530 O64530]
−
** [http://www.uniprot.org/uniprot/P54904 P54904]
+
** [http://www.uniprot.org/uniprot/O50573 O50573]
−
** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
+
** [http://www.uniprot.org/uniprot/Q9M4F7 Q9M4F7]
−
** [http://www.uniprot.org/uniprot/P17817 P17817]
+
** [http://www.uniprot.org/uniprot/Q9SCY8 Q9SCY8]
−
** [http://www.uniprot.org/uniprot/P32263 P32263]
+
** [http://www.uniprot.org/uniprot/Q9S7Y9 Q9S7Y9]
−
** [http://www.uniprot.org/uniprot/Q12641 Q12641]
 
−
** [http://www.uniprot.org/uniprot/P46725 P46725]
 
−
** [http://www.uniprot.org/uniprot/P74572 P74572]
 
−
** [http://www.uniprot.org/uniprot/Q04708 Q04708]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pyrroline-5-carboxylate reductase}}
+
{{#set: common-name=thiosulfate sulfurtransferase}}
−
{{#set: ec-number=ec-1.5.1.2}}
+
{{#set: ec-number=ec-2.8.1.1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:15, 14 January 2021

Reaction THIOSULFATE-SULFURTRANSFERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • thiosulfate sulfurtransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5350, thiosulfate disproportionation IV (rhodanese):
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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