Difference between revisions of "ExchangeSeed-MG+2"

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(Created page with "Category:reaction == Reaction RXN-7667 == * direction: ** left-to-right * common-name: ** udp-α-d-glucose:glucosyl-glycogenin α-d-glucosyltransferase * ec-numb...")
(Created page with "Category:reaction == Reaction PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol-3-phosphate 3-phosphatase * ec...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7667 ==
+
== Reaction PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-α-d-glucose:glucosyl-glycogenin α-d-glucosyltransferase
+
** phosphatidylinositol-3-phosphate 3-phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.186 ec-2.4.1.186]
+
** [http://enzyme.expasy.org/EC/3.1.3.64 ec-3.1.3.64]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12575]][c] '''+''' 1 [[GLUCOSYL-GLYCOGENIN]][c] '''=>''' 1 [[CPD-7010]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[CPD-177]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-phosphatidyl-inositols]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20314]]
+
* Gene: [[SJ16630]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21565]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13292]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18392]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5067]], glycogen biosynthesis II (from UDP-D-Glucose):
+
* [[PWY-6368]], 3-phosphoinositide degradation:
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6580]], phosphatidylinositol biosynthesis I (bacteria):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12317 12317]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03363 R03363]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=udp-α-d-glucose:glucosyl-glycogenin α-d-glucosyltransferase}}
+
{{#set: common-name=phosphatidylinositol-3-phosphate 3-phosphatase}}
−
{{#set: ec-number=ec-2.4.1.186}}
+
{{#set: ec-number=ec-3.1.3.64}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:16, 14 January 2021

Reaction PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphatidylinositol-3-phosphate 3-phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6368, 3-phosphoinositide degradation:
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6580, phosphatidylinositol biosynthesis I (bacteria):
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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