Difference between revisions of "ATDGD"
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(Created page with "Category:reaction == Reaction RXN-10039 == * direction: ** left-to-right * common-name: ** selenocysteine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.9.1.2 ec-...") |
(Created page with "Category:reaction == Reaction RXN1F-93 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.23 ec-1.14.11.23] == Reaction formula == * 1 [...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN1F-93 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
− | |||
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.14.11.23 ec-1.14.11.23] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD1F-90]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | |
− | + | * Gene: [[SJ07557]] | |
− | * | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14670]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14672]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14677]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14675]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08018]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6787]], flavonoid biosynthesis (in equisetum): |
− | ** '''4''' reactions found over ''' | + | ** '''6''' reactions found over '''10''' reactions in the full pathway |
+ | * [[PWY-3101]], flavonol biosynthesis: | ||
+ | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
== External links == | == External links == | ||
− | |||
− | |||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03126 R03126] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | + | {{#set: ec-number=ec-1.14.11.23}} | |
− | {{#set: ec-number=ec- | + | {{#set: nb gene associated=6}} |
− | {{#set: nb gene associated= | + | {{#set: nb pathway associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: reconstruction category=orthology}} |
− | {{#set: reconstruction category= | + | {{#set: reconstruction tool=pantograph}} |
− | {{#set: reconstruction tool= | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:18, 14 January 2021
Contents
Reaction RXN1F-93
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 DIHYDROKAEMPFEROL-CMPD[c] + 1 OXYGEN-MOLECULE[c] => 1 CARBON-DIOXIDE[c] + 1 CPD1F-90[c] + 1 PROTON[c] + 1 SUC[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ07557
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14670
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14672
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14677
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14675
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ08018
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6787, flavonoid biosynthesis (in equisetum):
- 6 reactions found over 10 reactions in the full pathway
- PWY-3101, flavonol biosynthesis:
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links
- LIGAND-RXN: