Difference between revisions of "RXN-15513"
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(Created page with "Category:reaction == Reaction RXN-8340 == * direction: ** left-to-right * common-name: ** gtp 3',8'-cyclase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.99.22 ec-4.1.9...") |
(Created page with "Category:reaction == Reaction GSAAMINOTRANS-RXN == * direction: ** left-to-right * common-name: ** glutamate-1-semialdehyde aminotransferase * ec-number: ** [http://enzyme...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction GSAAMINOTRANS-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** glutamate-1-semialdehyde aminotransferase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/4. | + | ** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ13978]] |
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): |
− | ** ''' | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P18492 P18492] | ||
+ | ** [http://www.uniprot.org/uniprot/P21267 P21267] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06741 Q06741] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06774 Q06774] | ||
+ | ** [http://www.uniprot.org/uniprot/P23893 P23893] | ||
+ | ** [http://www.uniprot.org/uniprot/O26330 O26330] | ||
+ | ** [http://www.uniprot.org/uniprot/P30949 P30949] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10] | ||
+ | ** [http://www.uniprot.org/uniprot/O29027 O29027] | ||
+ | ** [http://www.uniprot.org/uniprot/P45621 P45621] | ||
+ | ** [http://www.uniprot.org/uniprot/P24630 P24630] | ||
+ | ** [http://www.uniprot.org/uniprot/P31593 P31593] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39566 Q39566] | ||
+ | ** [http://www.uniprot.org/uniprot/P48247 P48247] | ||
+ | ** [http://www.uniprot.org/uniprot/P46716 P46716] | ||
+ | ** [http://www.uniprot.org/uniprot/Q40147 Q40147] | ||
+ | ** [http://www.uniprot.org/uniprot/O74061 O74061] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=glutamate-1-semialdehyde aminotransferase}} |
− | {{#set: ec-number=ec-4. | + | {{#set: ec-number=ec-5.4.3.8}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:18, 14 January 2021
Contents
Reaction GSAAMINOTRANS-RXN
- direction:
- left-to-right
- common-name:
- glutamate-1-semialdehyde aminotransferase
- ec-number:
Reaction formula
- 1 GLUTAMATE-1-SEMIALDEHYDE[c] => 1 5-AMINO-LEVULINATE[c]
Gene(s) associated with this reaction
- Gene: SJ13978
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links