Difference between revisions of "SJ19906"

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(Created page with "Category:gene == Gene SJ19893 == * transcription-direction: ** negative * right-end-position: ** 55031 * left-end-position: ** 50926 * centisome-position: ** 23.39113...")
(Created page with "Category:gene == Gene SJ17935 == * transcription-direction: ** negative * right-end-position: ** 73269 * left-end-position: ** 63525 * centisome-position: ** 25.018707...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19893 ==
+
== Gene SJ17935 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 55031
+
** 73269
 
* left-end-position:
 
* left-end-position:
−
** 50926
+
** 63525
 
* centisome-position:
 
* centisome-position:
−
** 23.39113    
+
** 25.018707    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[GALACTOKIN-RXN]]
−
* [[DCTP-PYROPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DUTP-PYROP-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14139]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14140]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-1602]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-1603]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-383]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
* [[UDPGLUCEPIM-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-384]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-385]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-4401]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5107]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-6382]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
</div>
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7206]]
+
* [[PWY-3821]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7187]]
+
* [[PWY-6527]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY0-166]]
+
* [[PWY-6317]]
−
** '''14''' reactions found over '''13''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY66-422]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7344]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7821]]
+
* [[COLANSYN-PWY]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6397]]
 +
** '''1''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-7328]]
 +
** '''5''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=55031}}
+
{{#set: right-end-position=73269}}
−
{{#set: left-end-position=50926}}
+
{{#set: left-end-position=63525}}
−
{{#set: centisome-position=23.39113   }}
+
{{#set: centisome-position=25.018707   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=13}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=8}}

Revision as of 18:42, 14 January 2021

Gene SJ17935

  • transcription-direction:
    • negative
  • right-end-position:
    • 73269
  • left-end-position:
    • 63525
  • centisome-position:
    • 25.018707

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-3821
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422
    • 5 reactions found over n.a reactions in the full pathway
  • PWY-7344
    • 1 reactions found over 1 reactions in the full pathway
  • COLANSYN-PWY
    • 6 reactions found over 1 reactions in the full pathway
  • PWY-6397
    • 1 reactions found over 17 reactions in the full pathway
  • PWY-7328
    • 5 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19906&oldid=92810"