Difference between revisions of "SJ16894"

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(Created page with "Category:gene == Gene SJ10812 == * transcription-direction: ** positive * right-end-position: ** 144763 * left-end-position: ** 116858 * centisome-position: ** 30.486155...")
(Created page with "Category:gene == Gene SJ16612 == * transcription-direction: ** negative * right-end-position: ** 601834 * left-end-position: ** 579602 * centisome-position: ** 84.808426...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10812 ==
+
== Gene SJ16612 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 144763
+
** 601834
 
* left-end-position:
 
* left-end-position:
−
** 116858
+
** 579602
 
* centisome-position:
 
* centisome-position:
−
** 30.486155    
+
** 84.808426    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-12461]]
−
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTAMATESYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTAMIN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTDEHYD-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12878]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7888]]
−
* [[PWY-6549]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6829]]
−
* [[PWY-4341]]
+
** '''11''' reactions found over '''15''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-6964]]
+
{{#set: right-end-position=601834}}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: left-end-position=579602}}
−
* [[PWY-6963]]
+
{{#set: centisome-position=84.808426   }}
−
** '''4''' reactions found over '''2''' reactions in the full pathway
 
−
* [[GLUGLNSYN-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUTSYN-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUTAMINEFUM-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUTAMINDEG-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[GLUTSYNIII-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5675]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY490-3]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=144763}}
 
−
{{#set: left-end-position=116858}}
 
−
{{#set: centisome-position=30.486155   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=2}}

Revision as of 18:45, 14 January 2021

Gene SJ16612

  • transcription-direction:
    • negative
  • right-end-position:
    • 601834
  • left-end-position:
    • 579602
  • centisome-position:
    • 84.808426

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7888
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6829
    • 11 reactions found over 15 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16894&oldid=94294"