Difference between revisions of "SJ07195"

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(Created page with "Category:gene == Gene SJ10794 == * transcription-direction: ** positive * right-end-position: ** 314960 * left-end-position: ** 295807 * centisome-position: ** 77.13089...")
(Created page with "Category:gene == Gene SJ10416 == * transcription-direction: ** negative * right-end-position: ** 102533 * left-end-position: ** 77700 * centisome-position: ** 19.84056...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10794 ==
+
== Gene SJ10416 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 314960
+
** 102533
 
* left-end-position:
 
* left-end-position:
−
** 295807
+
** 77700
 
* centisome-position:
 
* centisome-position:
−
** 77.13089    
+
** 19.84056    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HOMOCYSMET-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[RXN-14918]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14919]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-2542]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-2562]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 19: Line 29:
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12730]]
+
* [[TOCOPHEROL-O-METHYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5041]]
+
* [[PWY-7436]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[HSERMETANA-PWY]]
+
* [[PWY-1422]]
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[HOMOSER-METSYN-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=102533}}
−
* [[PWY-6151]]
+
{{#set: left-end-position=77700}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=19.84056   }}
−
* [[PWY-702]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6936]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=314960}}
 
−
{{#set: left-end-position=295807}}
 
−
{{#set: centisome-position=77.13089   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=2}}

Revision as of 18:49, 14 January 2021

Gene SJ10416

  • transcription-direction:
    • negative
  • right-end-position:
    • 102533
  • left-end-position:
    • 77700
  • centisome-position:
    • 19.84056

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7436
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-1422
    • 5 reactions found over 7 reactions in the full pathway




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