Difference between revisions of "SJ14140"
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(Created page with "Category:gene == Gene SJ04393 == * transcription-direction: ** positive * right-end-position: ** 12820 * left-end-position: ** 7673 * centisome-position: ** 7.1205845...") |
(Created page with "Category:gene == Gene SJ00579 == * transcription-direction: ** positive * right-end-position: ** 108541 * left-end-position: ** 100562 * centisome-position: ** 60.869198...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ00579 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 108541 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 100562 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 60.869198 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[SMO]] | |
| − | * [[RXN | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[SQUALENE-MONOOXYGENASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | |||
| − | |||
| − | ** Category: [[ | ||
| − | *** source: [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6098]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-5670]] |
** '''2''' reactions found over '''3''' reactions in the full pathway | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=108541}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=100562}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=60.869198 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Revision as of 18:50, 14 January 2021
Contents
Gene SJ00579
- transcription-direction:
- positive
- right-end-position:
- 108541
- left-end-position:
- 100562
- centisome-position:
- 60.869198
Organism(s) associated with this gene
Reaction(s) associated
- SMO
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- SQUALENE-MONOOXYGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6098
- 2 reactions found over 2 reactions in the full pathway
- PWY-5670
- 2 reactions found over 3 reactions in the full pathway
