Difference between revisions of "SJ00579"

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(Created page with "Category:gene == Gene SJ14704 == * transcription-direction: ** negative * right-end-position: ** 83820 * left-end-position: ** 78019 * centisome-position: ** 25.118479...")
(Created page with "Category:gene == Gene SJ12700 == * transcription-direction: ** positive * right-end-position: ** 349973 * left-end-position: ** 345234 * centisome-position: ** 97.067184...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14704 ==
+
== Gene SJ12700 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 83820
+
** 349973
 
* left-end-position:
 
* left-end-position:
−
** 78019
+
** 345234
 
* centisome-position:
 
* centisome-position:
−
** 25.118479    
+
** 97.067184    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN]]
+
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3PGAREARR-RXN]]
+
* [[GLUTAMIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12878]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6549]]
−
* [[PWY-6142]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-4341]]
−
* [[PWY-7003]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''8''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-6964]]
−
* [[PWY-7218]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''7''' reactions found over '''4''' reactions in the full pathway
+
* [[CITRULBIO-PWY]]
−
* [[GLYCOLYSIS]]
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[GLUTAMINDEG-PWY]]
−
* [[P341-PWY]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-5723]]
+
{{#set: right-end-position=349973}}
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
{{#set: left-end-position=345234}}
−
* [[P124-PWY]]
+
{{#set: centisome-position=97.067184   }}
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-2221]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=83820}}
 
−
{{#set: left-end-position=78019}}
 
−
{{#set: centisome-position=25.118479   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=5}}

Revision as of 18:50, 14 January 2021

Gene SJ12700

  • transcription-direction:
    • positive
  • right-end-position:
    • 349973
  • left-end-position:
    • 345234
  • centisome-position:
    • 97.067184

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6549
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-4341
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6964
    • 2 reactions found over 2 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00579&oldid=96715"