Difference between revisions of "1-4-beta-Xylan"

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(Created page with "Category:gene == Gene SJ00547 == * transcription-direction: ** positive * right-end-position: ** 25503 * left-end-position: ** 23467 * centisome-position: ** 14.179884...")
(Created page with "Category:metabolite == Metabolite CPD-11524 == * common-name: ** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-coa * smiles: ** ccc=ccc1(c(ccc(=o)1)cccc(=o)cc(s...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ00547 ==
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== Metabolite CPD-11524 ==
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* transcription-direction:
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* common-name:
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** positive
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** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-coa
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* right-end-position:
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* smiles:
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** 25503
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** ccc=ccc1(c(ccc(=o)1)cccc(=o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])=o)
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* left-end-position:
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* inchi-key:
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** 23467
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** adgirvmshggghu-azvxsvfwsa-j
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* centisome-position:
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* molecular-weight:
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** 14.179884   
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** 1025.85
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-10700]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[3.2.1.1-RXN]]
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* [[RXN-10702]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-coa}}
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* [[ALPHA-AMYL-RXN]]
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{{#set: inchi-key=inchikey=adgirvmshggghu-azvxsvfwsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=1025.85}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-1823]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-1825]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5181]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=25503}}
 
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{{#set: left-end-position=23467}}
 
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{{#set: centisome-position=14.179884    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 

Revision as of 20:31, 18 December 2020

Metabolite CPD-11524

  • common-name:
    • 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-coa
  • smiles:
    • ccc=ccc1(c(ccc(=o)1)cccc(=o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])=o)
  • inchi-key:
    • adgirvmshggghu-azvxsvfwsa-j
  • molecular-weight:
    • 1025.85

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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