Difference between revisions of "1-L-MYO-INOSITOL-1-P"

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(Created page with "Category:gene == Gene SJ15075 == * transcription-direction: ** negative * right-end-position: ** 277459 * left-end-position: ** 264854 * centisome-position: ** 87.461365...")
(Created page with "Category:metabolite == Metabolite CPD-18493 == * common-name: ** (3s)-hydroxy-(6z,9z,12z,15z,18z)-tetracosapentaenoyl-coa * smiles: ** cccccc=ccc=ccc=ccc=ccc=cccc(o)cc(scc...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ15075 ==
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== Metabolite CPD-18493 ==
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* transcription-direction:
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* common-name:
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** negative
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** (3s)-hydroxy-(6z,9z,12z,15z,18z)-tetracosapentaenoyl-coa
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* right-end-position:
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* smiles:
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** 277459
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** cccccc=ccc=ccc=ccc=ccc=cccc(o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
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* left-end-position:
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* inchi-key:
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** 264854
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** nneppynerzejee-vugypbmhsa-j
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* centisome-position:
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* molecular-weight:
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** 87.461365   
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** 1120.05
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17114]]
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* [[RXN-13398]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(3s)-hydroxy-(6z,9z,12z,15z,18z)-tetracosapentaenoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=nneppynerzejee-vugypbmhsa-j}}
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** Category: [[orthology]]
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{{#set: molecular-weight=1120.05}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-7676]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-7677]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-5068]]
 
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** '''4''' reactions found over '''7''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=277459}}
 
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{{#set: left-end-position=264854}}
 
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{{#set: centisome-position=87.461365    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=1}}
 

Revision as of 20:34, 18 December 2020

Metabolite CPD-18493

  • common-name:
    • (3s)-hydroxy-(6z,9z,12z,15z,18z)-tetracosapentaenoyl-coa
  • smiles:
    • cccccc=ccc=ccc=ccc=ccc=cccc(o)cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
  • inchi-key:
    • nneppynerzejee-vugypbmhsa-j
  • molecular-weight:
    • 1120.05

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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