Difference between revisions of "1-PHOSPHATIDYLINOSITOL-KINASE-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction 1-PHOSPHATIDYLINOSITOL-KINASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol 4-kinase ** 1-phosphatidylinositol...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519] ==
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== Reaction 1-PHOSPHATIDYLINOSITOL-KINASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** 8-amino-7-oxononanoate biosynthesis i
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** phosphatidylinositol 4-kinase
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== Reaction(s) found ==
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** 1-phosphatidylinositol 4-kinase
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* [[RXN-11474]]
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* ec-number:
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* [[RXN-11475]]
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** [http://enzyme.expasy.org/EC/2.7.1.67 ec-2.7.1.67]
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* [[RXN-11476]]
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== Reaction formula ==
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* [[RXN-11477]]
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* 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-1108]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-11478]]
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== Gene(s) associated with this reaction  ==
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* [[RXN-11479]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-11480]]
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* Gene: [[SJ05323]]
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* [[RXN-11481]]
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** Category: [[annotation]]
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* [[RXN-11482]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) not found ==
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* Gene: [[SJ15728]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11484 RXN-11484]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11483 RXN-11483]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: taxonomic-range=tax-2}}
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* Gene: [[SJ12598]]
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{{#set: common-name=8-amino-7-oxononanoate biosynthesis i}}
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** Category: [[annotation]]
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{{#set: nb reaction found=9}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.82}}
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* Gene: [[SJ19880]]
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{{#set: nb total reaction=11}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ21404]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ03632]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ20688]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6352]], 3-phosphoinositide biosynthesis:
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** '''5''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR114879
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19878 19878]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03361 R03361]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P18688 P18688]
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** [http://www.uniprot.org/uniprot/P12798 P12798]
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** [http://www.uniprot.org/uniprot/P39104 P39104]
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** [http://www.uniprot.org/uniprot/P42356 P42356]
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** [http://www.uniprot.org/uniprot/Q9UBF8 Q9UBF8]
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** [http://www.uniprot.org/uniprot/P37297 P37297]
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** [http://www.uniprot.org/uniprot/Q28925 Q28925]
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** [http://www.uniprot.org/uniprot/O81281 O81281]
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** [http://www.uniprot.org/uniprot/O81129 O81129]
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** [http://www.uniprot.org/uniprot/Q9ZPE1 Q9ZPE1]
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{{#set: direction=left-to-right}}
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{{#set: common-name=phosphatidylinositol 4-kinase|1-phosphatidylinositol 4-kinase}}
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{{#set: ec-number=ec-2.7.1.67}}
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{{#set: nb gene associated=7}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 1-PHOSPHATIDYLINOSITOL-KINASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphatidylinositol 4-kinase
    • 1-phosphatidylinositol 4-kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6352, 3-phosphoinositide biosynthesis:
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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