Difference between revisions of "1-gamma-linolenoyl-2-acyl-glycerolipids"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10704 RXN-10704] == * direction: ** left-to-right * common-name: ** opc6-trans-2-enoyl-coa hydr...")
 
(Created page with "Category:gene == Gene SJ18728 == * transcription-direction: ** positive * right-end-position: ** 23943 * left-end-position: ** 11678 * centisome-position: ** 4.8990035...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10704 RXN-10704] ==
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== Gene SJ18728 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* common-name:
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* right-end-position:
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** opc6-trans-2-enoyl-coa hydratase
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** 23943
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** enoyl-coa hydratase
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* left-end-position:
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* ec-number:
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** 11678
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** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
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* centisome-position:
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== Reaction formula ==
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** 4.8990035   
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* 1 [[CPD-11522]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-11523]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) associated ==
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* Gene: [[SJ03584]]
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* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ14591]]
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[SJ07211]]
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{{#set: transcription-direction=positive}}
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** Category: [[annotation]]
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{{#set: right-end-position=23943}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: left-end-position=11678}}
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** Category: [[orthology]]
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{{#set: centisome-position=4.8990035    }}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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* Gene: [[SJ21390]]
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{{#set: nb reaction associated=2}}
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ10275]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ03913]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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</div>
 
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== Pathway(s)  ==
 
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 
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** '''16''' reactions found over '''19''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=enoyl-coa hydratase|opc6-trans-2-enoyl-coa hydratase}}
 
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{{#set: ec-number=ec-4.2.1.17}}
 
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{{#set: nb gene associated=6}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 14:24, 26 August 2019

Gene SJ18728

  • transcription-direction:
    • positive
  • right-end-position:
    • 23943
  • left-end-position:
    • 11678
  • centisome-position:
    • 4.8990035

Organism(s) associated with this gene

Reaction(s) associated




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