Difference between revisions of "1.1.1.197-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7101 PWY-7101] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction RXN-12567 == * direction: ** left-to-right * common-name: ** enoyl-coa hydratase ** 3-hydroxyhexanoyl-coa dehydratase * ec-number: ** [http:/...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7101 PWY-7101] ==
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== Reaction RXN-12567 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
 
* common-name:
 
* common-name:
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** 5-deoxystrigol biosynthesis
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** enoyl-coa hydratase
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== Reaction(s) found ==
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** 3-hydroxyhexanoyl-coa dehydratase
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* [[RXN-13641]]
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* ec-number:
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13645 RXN-13645]
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13642 RXN-13642]
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* 1 [[OH-HEXANOYL-COA]][c] '''=>''' 1 [[CPD0-2121]][c] '''+''' 1 [[WATER]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13644 RXN-13644]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13643 RXN-13643]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: taxonomic-range=tax-33090}}
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* Gene: [[SJ00040]]
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{{#set: common-name=5-deoxystrigol biosynthesis}}
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** Category: [[orthology]]
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{{#set: nb reaction found=1}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: completion rate=0.2}}
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* Gene: [[SJ03913]]
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{{#set: nb total reaction=5}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ03584]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10275]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ21390]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ07211]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ14591]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered):
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** '''9''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30549 30549]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749]
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{{#set: direction=left-to-right}}
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{{#set: common-name=3-hydroxyhexanoyl-coa dehydratase|enoyl-coa hydratase}}
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{{#set: ec-number=ec-4.2.1.17}}
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{{#set: nb gene associated=7}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina}}

Revision as of 20:45, 18 December 2020

Reaction RXN-12567

  • direction:
    • left-to-right
  • common-name:
    • enoyl-coa hydratase
    • 3-hydroxyhexanoyl-coa dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6863, pyruvate fermentation to hexanol (engineered):
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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