Difference between revisions of "1.1.1.211-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-11244 == * direction: ** left-to-right * common-name: ** enoyl-coa hydratase ** 4-coumaroyl-coa hydratase * ec-number: ** [http://enzyme....")
(Created page with "Category:reaction == Reaction 1.1.1.211-RXN == * direction: ** reversible * common-name: ** long-chain-3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expas...")
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11244 ==
+
== Reaction 1.1.1.211-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** enoyl-coa hydratase
+
** long-chain-3-hydroxyacyl-coa dehydrogenase
−
** 4-coumaroyl-coa hydratase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/1.1.1.211 ec-1.1.1.211]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12199]][c]
+
* 1 [[Long-Chain-3S-Hydroxyacyl-CoAs]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[Long-Chain-oxoacyl-CoAs]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ16470]]
−
* Gene: [[SJ10275]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03584]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14591]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
Line 24: Line 16:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07211]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03913]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7046]], 4-coumarate degradation (anaerobic):
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6435]], 4-hydroxybenzoate biosynthesis III (plants):
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR114885
−
{{#set: common-name=4-coumaroyl-coa hydratase|enoyl-coa hydratase}}
+
* LIGAND-RXN:
−
{{#set: ec-number=ec-4.2.1.17}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
−
{{#set: nb gene associated=6}}
+
* UNIPROT:
−
{{#set: nb pathway associated=2}}
+
** [http://www.uniprot.org/uniprot/Q64428 Q64428]
−
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.uniprot.org/uniprot/P40939 P40939]
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: direction=reversible}}
 +
{{#set: common-name=long-chain-3-hydroxyacyl-coa dehydrogenase}}
 +
{{#set: ec-number=ec-1.1.1.211}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction 1.1.1.211-RXN

  • direction:
    • reversible
  • common-name:
    • long-chain-3-hydroxyacyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=1.1.1.211-RXN&oldid=140347"