Difference between revisions of "1.1.1.271-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...")
(Created page with "Category:reaction == Reaction 1.1.1.271-RXN == * direction: ** left-to-right * common-name: ** gdp-fucose synthase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.271 e...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101] ==
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== Reaction 1.1.1.271-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-71275 tax-71275]
 
 
* common-name:
 
* common-name:
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** d-sorbitol degradation i
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** gdp-fucose synthase
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== Reaction(s) found ==
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* ec-number:
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* [[FRUCTOKINASE-RXN]]
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** [http://enzyme.expasy.org/EC/1.1.1.271 ec-1.1.1.271]
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* [[RXN-7644]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13118]][c] '''+''' 1 [[NADP]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14515 RXN-14515]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-71275|tax-4751|tax-2}}
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* Gene: [[SJ05880]]
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{{#set: common-name=d-sorbitol degradation i}}
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** Category: [[annotation]]
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{{#set: nb reaction found=2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.67}}
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** Category: [[orthology]]
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{{#set: nb total reaction=3}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose):
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR100108
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18887 18887]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R05692 R05692]
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{{#set: direction=left-to-right}}
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{{#set: common-name=gdp-fucose synthase}}
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{{#set: ec-number=ec-1.1.1.271}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction 1.1.1.271-RXN

  • direction:
    • left-to-right
  • common-name:
    • gdp-fucose synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-66, GDP-L-fucose biosynthesis I (from GDP-D-mannose):
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100108
  • RHEA:
  • LIGAND-RXN:





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