Difference between revisions of "1.1.1.272-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction ACOA160OR == * direction: ** left-to-right * common-name: ** palmitoyl-coa:oxygen 2-oxidoreductase == Reaction formula == * 1.0 FAD[x] ''...") |
(Created page with "Category:reaction == Reaction DAHPSYN-RXN == * direction: ** reversible * common-name: ** 2-dehydro-3-deoxyphosphoheptonate aldolase * ec-number: ** [http://enzyme.expasy....") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction DAHPSYN-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** 2-dehydro-3-deoxyphosphoheptonate aldolase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.5.1.54 ec-2.5.1.54] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ04251]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-6164]], 3-dehydroquinate biosynthesis I: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: common-name= | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14720 14720] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
− | {{#set: reconstruction category=orthology}} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01826 R01826] |
− | {{#set: reconstruction tool=pantograph}} | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P0A1B5 P0A1B5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JSQ8 Q9JSQ8] | ||
+ | ** [http://www.uniprot.org/uniprot/P00887 P00887] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AB91 P0AB91] | ||
+ | ** [http://www.uniprot.org/uniprot/P00888 P00888] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPJ1 Q9PPJ1] | ||
+ | ** [http://www.uniprot.org/uniprot/P46245 P46245] | ||
+ | ** [http://www.uniprot.org/uniprot/P35170 P35170] | ||
+ | ** [http://www.uniprot.org/uniprot/P44303 P44303] | ||
+ | ** [http://www.uniprot.org/uniprot/P34725 P34725] | ||
+ | ** [http://www.uniprot.org/uniprot/P39912 P39912] | ||
+ | ** [http://www.uniprot.org/uniprot/P14843 P14843] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02285 Q02285] | ||
+ | ** [http://www.uniprot.org/uniprot/P32449 P32449] | ||
+ | ** [http://www.uniprot.org/uniprot/P37215 P37215] | ||
+ | ** [http://www.uniprot.org/uniprot/P37216 P37216] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09755 Q09755] | ||
+ | ** [http://www.uniprot.org/uniprot/Q00218 Q00218] | ||
+ | ** [http://www.uniprot.org/uniprot/P29976 P29976] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42921 Q42921] | ||
+ | ** [http://www.uniprot.org/uniprot/O22407 O22407] | ||
+ | ** [http://www.uniprot.org/uniprot/O52798 O52798] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=2-dehydro-3-deoxyphosphoheptonate aldolase}} | ||
+ | {{#set: ec-number=ec-2.5.1.54}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:17, 14 January 2021
Contents
Reaction DAHPSYN-RXN
- direction:
- reversible
- common-name:
- 2-dehydro-3-deoxyphosphoheptonate aldolase
- ec-number:
Reaction formula
- 1 ERYTHROSE-4P[c] + 1 PHOSPHO-ENOL-PYRUVATE[c] + 1 WATER[c] <=> 1 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ04251
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6164, 3-dehydroquinate biosynthesis I:
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links