Difference between revisions of "1.1.1.51-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] == * direction: ** reversible * common-name: ** uridine phosphorylase * ec-n...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-25 RXN3DJ-25] == * direction: ** left-to-right * common-name: ** sphingosine-1-phosphate pho...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-25 RXN3DJ-25] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** uridine phosphorylase
+
** sphingosine-1-phosphate phosphatase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4.2.2]
 
−
** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2.4.2.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[URACIL]][c]
+
* 1 [[CPD3DJ-11366]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SPHINGOSINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03195]]
+
* Gene: [[SJ19405]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5532 PWY-5532]
+
* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24391 24391]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27519 27519]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01876 R01876]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06521 R06521]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P52624 P52624]
+
{{#set: common-name=sphingosine-1-phosphate phosphatase}}
−
** [http://www.uniprot.org/uniprot/P43770 P43770]
 
−
** [http://www.uniprot.org/uniprot/Q16831 Q16831]
 
−
** [http://www.uniprot.org/uniprot/P12758 P12758]
 
−
** [http://www.uniprot.org/uniprot/P19662 P19662]
 
−
** [http://www.uniprot.org/uniprot/O08444 O08444]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=uridine phosphorylase}}
 
−
{{#set: ec-number=ec-2.4.2.2|ec-2.4.2.3}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction RXN3DJ-25

  • direction:
    • left-to-right
  • common-name:
    • sphingosine-1-phosphate phosphatase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3DJ-11470, sphingosine and sphingosine-1-phosphate metabolism: PWY3DJ-11470
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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