Difference between revisions of "1.1.1.8-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN == * direction: ** left-to-right * common-name: ** alcohol dehydrogenase (nadp+) ** aldehyde reductase *...")
(Created page with "Category:reaction == Reaction 1.1.1.8-RXN == * direction: ** left-to-right * common-name: ** glycerol 3-phosphate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/E...")
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN ==
+
== Reaction 1.1.1.8-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** alcohol dehydrogenase (nadp+)
+
** glycerol 3-phosphate dehydrogenase
−
** aldehyde reductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.2 ec-1.1.1.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.8 ec-1.1.1.8]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Aldehydes]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ16475]]
−
* Gene: [[SJ06470]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ06456]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05644]]
+
* Gene: [[SJ00878]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13034]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12574]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ07103]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10501]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ19151]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6118]], glycerol-3-phosphate shuttle:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7411]], phosphatidate biosynthesis (yeast):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR99876
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15940 15940]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07328 R07328]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00842 R00842]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P14941 P14941]
+
** [http://www.uniprot.org/uniprot/P13707 P13707]
−
** [http://www.uniprot.org/uniprot/P14550 P14550]
+
** [http://www.uniprot.org/uniprot/P08507 P08507]
−
** [http://www.uniprot.org/uniprot/P35630 P35630]
+
** [http://www.uniprot.org/uniprot/O25614 O25614]
−
** [http://www.uniprot.org/uniprot/Q9PMC1 Q9PMC1]
+
** [http://www.uniprot.org/uniprot/Q9JWH0 Q9JWH0]
−
** [http://www.uniprot.org/uniprot/O06007 O06007]
+
** [http://www.uniprot.org/uniprot/P43798 P43798]
−
** [http://www.uniprot.org/uniprot/Q7M0Z4 Q7M0Z4]
+
** [http://www.uniprot.org/uniprot/O29390 O29390]
−
** [http://www.uniprot.org/uniprot/P75691 P75691]
+
** [http://www.uniprot.org/uniprot/P46919 P46919]
−
** [http://www.uniprot.org/uniprot/P0A4X0 P0A4X0]
+
** [http://www.uniprot.org/uniprot/P07735 P07735]
−
** [http://www.uniprot.org/uniprot/P0A4X1 P0A4X1]
+
** [http://www.uniprot.org/uniprot/P13706 P13706]
−
** [http://www.uniprot.org/uniprot/Q7M543 Q7M543]
+
** [http://www.uniprot.org/uniprot/Q00055 Q00055]
−
** [http://www.uniprot.org/uniprot/Q7M544 Q7M544]
+
** [http://www.uniprot.org/uniprot/P34517 P34517]
−
** [http://www.uniprot.org/uniprot/P25377 P25377]
+
** [http://www.uniprot.org/uniprot/P0A6S7 P0A6S7]
−
** [http://www.uniprot.org/uniprot/Q04894 Q04894]
+
** [http://www.uniprot.org/uniprot/P21695 P21695]
−
** [http://www.uniprot.org/uniprot/P77990 P77990]
+
** [http://www.uniprot.org/uniprot/P41911 P41911]
−
** [http://www.uniprot.org/uniprot/P75214 P75214]
+
** [http://www.uniprot.org/uniprot/P90593 P90593]
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=aldehyde reductase|alcohol dehydrogenase (nadp+)}}
+
{{#set: common-name=glycerol 3-phosphate dehydrogenase}}
−
{{#set: ec-number=ec-1.1.1.2}}
+
{{#set: ec-number=ec-1.1.1.8}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 1.1.1.8-RXN

  • direction:
    • left-to-right
  • common-name:
    • glycerol 3-phosphate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6118, glycerol-3-phosphate shuttle:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7411, phosphatidate biosynthesis (yeast):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=1.1.1.8-RXN&oldid=142792"