Difference between revisions of "1.14.13.70-RXN"

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(Created page with "Category:reaction == Reaction RXN0-2161 == * direction: ** left-to-right * common-name: ** l-serine:trnasec ligase (amp-forming) * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction 1.14.13.70-RXN == * direction: ** left-to-right * common-name: ** obtusifoliol-14α-demethylase * ec-number: ** [http://enzyme.expasy.or...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-2161 ==
+
== Reaction 1.14.13.70-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-serine:trnasec ligase (amp-forming)
+
** obtusifoliol-14α-demethylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.11 ec-6.1.1.11]
+
** [http://enzyme.expasy.org/EC/1.14.13.70 ec-1.14.13.70]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[tRNA-Sec]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-seryl-SEC-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 3 [[NADPH]][c] '''+''' 1 [[OBTUSIFOLIOL]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[ALPHA-METHYL-5-ALPHA-ERGOSTA]][c] '''+''' 1 [[FORMATE]][c] '''+''' 3 [[NADP]][c] '''+''' 4 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07311]]
+
* Gene: [[SJ05072]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14143]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 21: Line 16:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria):
+
* [[PWY-2541]], phytosterol biosynthesis (plants):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''11''' reactions found over '''35''' reactions in the full pathway
−
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR102134
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42581 42581]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14918 14918]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08218 R08218]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05731 R05731]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-serine:trnasec ligase (amp-forming)}}
+
{{#set: common-name=obtusifoliol-14α-demethylase}}
−
{{#set: ec-number=ec-6.1.1.11}}
+
{{#set: ec-number=ec-1.14.13.70}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction 1.14.13.70-RXN

  • direction:
    • left-to-right
  • common-name:
    • obtusifoliol-14α-demethylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2541, phytosterol biosynthesis (plants):
    • 11 reactions found over 35 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR102134
  • RHEA:
  • LIGAND-RXN:





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