Difference between revisions of "1.14.13.78-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.68-RXN 2.4.1.68-RXN] == * direction: ** left-to-right * common-name: ** glycoprotein 6-alpha-...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9787 RXN-9787] == * direction: ** reversible * common-name: ** cysteine:[thii sulfur-carrier pr...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.68-RXN 2.4.1.68-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9787 RXN-9787] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** glycoprotein 6-alpha-l-fucosyltransferase
+
** cysteine:[thii sulfur-carrier protein]-l-cysteine sulfurtransferase desulfurase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.68 ec-2.4.1.68]
+
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[CPD-13118]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[N4-N-ACETYL-BETA-D-GLUCOSAMINYL-F6]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CYS]][c] '''+''' 1 [[Sulfur-Carrier-Proteins-ThiI]][c] '''<=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[Sulfurylated-ThiI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02940]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ19133]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ22297]]
+
* Gene: [[SJ03223]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ07771]]
+
* Gene: [[SJ13485]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04060]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17324]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09474]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7426]], complex N-linked glycan biosynthesis (vertebrates): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7426 PWY-7426]
 
−
** '''4''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05988 R05988]
+
{{#set: common-name=cysteine:[thii sulfur-carrier protein]-l-cysteine sulfurtransferase desulfurase}}
−
* RHEA:
+
{{#set: ec-number=ec-2.8.1.7}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12985 12985]
+
{{#set: nb gene associated=6}}
−
* UNIPROT:
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9BYC5 Q9BYC5]
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: common-name=glycoprotein 6-alpha-l-fucosyltransferase}}
 
−
{{#set: ec-number=ec-2.4.1.68}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction RXN-9787

  • direction:
    • reversible
  • common-name:
    • cysteine:[thii sulfur-carrier protein]-l-cysteine sulfurtransferase desulfurase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Property "Common-name" (as page type) with input value "cysteine:[thii sulfur-carrier protein]-l-cysteine sulfurtransferase desulfurase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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