Difference between revisions of "1.14.21.6-RXN"

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(Created page with "Category:reaction == Reaction DNA-LIGASE-NAD+-RXN == * direction: ** left-to-right * common-name: ** dna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.5.1.6 ec-6.5...")
(Created page with "Category:reaction == Reaction RXN-6601 == * direction: ** left-to-right * common-name: ** γ-glutamyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.2.2...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DNA-LIGASE-NAD+-RXN ==
+
== Reaction RXN-6601 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dna ligase
+
** γ-glutamyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.5.1.6 ec-6.5.1.6]
+
** [http://enzyme.expasy.org/EC/2.3.2.2 ec-2.3.2.2]
−
** [http://enzyme.expasy.org/EC/6.5.1.2 ec-6.5.1.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Amino-Acids-20]][c] '''+''' 1 [[GLUTATHIONE]][c] '''=>''' 1 [[5-L-GLUTAMYL-L-AMINO-ACID]][c] '''+''' 1 [[CYS-GLY]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15543]]
+
* Gene: [[SJ08599]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ19344]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08598]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-4041]], γ-glutamyl cycle:
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00382 R00382]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P47496 P47496]
 
−
** [http://www.uniprot.org/uniprot/Q9PHT0 Q9PHT0]
 
−
** [http://www.uniprot.org/uniprot/Q9CIE4 Q9CIE4]
 
−
** [http://www.uniprot.org/uniprot/P43813 P43813]
 
−
** [http://www.uniprot.org/uniprot/O31498 O31498]
 
−
** [http://www.uniprot.org/uniprot/O25336 O25336]
 
−
** [http://www.uniprot.org/uniprot/O51502 O51502]
 
−
** [http://www.uniprot.org/uniprot/P15042 P15042]
 
−
** [http://www.uniprot.org/uniprot/P28719 P28719]
 
−
** [http://www.uniprot.org/uniprot/P49422 P49422]
 
−
** [http://www.uniprot.org/uniprot/P78021 P78021]
 
−
** [http://www.uniprot.org/uniprot/P72588 P72588]
 
−
** [http://www.uniprot.org/uniprot/Q49078 Q49078]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dna ligase}}
+
{{#set: common-name=γ-glutamyltransferase}}
−
{{#set: ec-number=ec-6.5.1.2|ec-6.5.1.6}}
+
{{#set: ec-number=ec-2.3.2.2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:36, 5 January 2021

Reaction RXN-6601

  • direction:
    • left-to-right
  • common-name:
    • γ-glutamyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4041, γ-glutamyl cycle:
    • 5 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=1.14.21.6-RXN&oldid=77247"