Difference between revisions of "1.2.1.2-RXN"

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(Created page with "Category:reaction == Reaction RXN-13709-4-METHYL-824-CHOLESTADIENOL/NADH/OXYGEN-MOLECULE/PROTON//CPD-4702/NAD/WATER.76. == * direction: ** left-to-right == Reaction formul...")
(Created page with "Category:reaction == Reaction RXN-13641 == * direction: ** reversible * common-name: ** β-carotene isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.2.1.14 ec-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13709-4-METHYL-824-CHOLESTADIENOL/NADH/OXYGEN-MOLECULE/PROTON//CPD-4702/NAD/WATER.76. ==
+
== Reaction RXN-13641 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** β-carotene isomerase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/5.2.1.14 ec-5.2.1.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[4-METHYL-824-CHOLESTADIENOL]][c] '''+''' 3.0 [[NADH]][c] '''+''' 3.0 [[OXYGEN-MOLECULE]][c] '''+''' 2.0 [[PROTON]][c] '''=>''' 1.0 [[CPD-4702]][c] '''+''' 3.0 [[NAD]][c] '''+''' 4.0 [[WATER]][c]
+
* 1 [[CPD1F-129]][c] '''<=>''' 1 [[CPD-14646]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ06689]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ20376]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18022]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7101]], 5-deoxystrigol biosynthesis:
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R10282 R10282]
−
{{#set: nb pathway associated=0}}
+
* RHEA:
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34458 34458]
−
{{#set: reconstruction tool=meneco}}
+
{{#set: direction=reversible}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: common-name=&beta;-carotene isomerase}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: ec-number=ec-5.2.1.14}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:19, 14 January 2021

Reaction RXN-13641

  • direction:
    • reversible
  • common-name:
    • β-carotene isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7101, 5-deoxystrigol biosynthesis:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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