Difference between revisions of "1.2.1.2-RXN"

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(Created page with "Category:reaction == Reaction 2.4.1.68-RXN == * direction: ** left-to-right * common-name: ** glycoprotein 6-alpha-l-fucosyltransferase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction 1.2.1.2-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.17.1.9 ec-1.17.1.9] == Reaction formula == * 1 FOR...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.1.68-RXN ==
+
== Reaction 1.2.1.2-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** glycoprotein 6-alpha-l-fucosyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.68 ec-2.4.1.68]
+
** [http://enzyme.expasy.org/EC/1.17.1.9 ec-1.17.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[CPD-13118]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[N4-N-ACETYL-BETA-D-GLUCOSAMINYL-F6]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[FORMATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02940]]
+
* Gene: [[SJ13526]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ22297]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ07771]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7426]], complex N-linked glycan biosynthesis (vertebrates):
+
* [[PWY-1881]], formate oxidation to CO2:
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-6696]], oxalate degradation III:
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR143749
+
* METANETX-RXN : MNXR99475
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15988 15988]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05988 R05988]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00519 R00519]
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12985 12985]
+
{{#set: ec-number=ec-1.17.1.9}}
−
* UNIPROT:
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9BYC5 Q9BYC5]
+
{{#set: nb pathway associated=4}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: common-name=glycoprotein 6-alpha-l-fucosyltransferase}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: ec-number=ec-2.4.1.68}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:23, 18 March 2021

Reaction 1.2.1.2-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1881, formate oxidation to CO2:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic):
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY, purine nucleobases degradation I (anaerobic):
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-6696, oxalate degradation III:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR99475
  • RHEA:
  • LIGAND-RXN:





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