Difference between revisions of "1.3.7.2-RXN"
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(Created page with "Category:reaction == Reaction PROTOHEMEFERROCHELAT-RXN == * direction: ** reversible * common-name: ** ferrochelatase * ec-number: ** [http://enzyme.expasy.org/EC/4.99.1.1...") |
(Created page with "Category:reaction == Reaction PROTOHEMEFERROCHELAT-RXN == * direction: ** reversible * common-name: ** ferrochelatase * ec-number: ** [http://enzyme.expasy.org/EC/4.99.1.1...") |
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic): | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III: | * [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III: | ||
| − | ** '''5''' reactions found over ''' | + | ** '''5''' reactions found over '''n.a''' reactions in the full pathway |
* [[HEMESYN2-PWY]], heme b biosynthesis II (oxygen-independent): | * [[HEMESYN2-PWY]], heme b biosynthesis II (oxygen-independent): | ||
** '''3''' reactions found over '''4''' reactions in the full pathway | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| Line 34: | Line 34: | ||
== External links == | == External links == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
| + | * METANETX-RXN : MNXR99471 | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584] | ||
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{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
{{#set: nb pathway associated=3}} | {{#set: nb pathway associated=3}} | ||
| − | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina| | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 08:34, 15 March 2021
Contents
Reaction PROTOHEMEFERROCHELAT-RXN
- direction:
- reversible
- common-name:
- ferrochelatase
- ec-number:
Reaction formula
- 1 PROTOHEME[c] + 2 PROTON[c] <=> 1 FE+2[c] + 1 PROTOPORPHYRIN_IX[c]
Gene(s) associated with this reaction
- Gene: SJ19310
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ19170
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- HEME-BIOSYNTHESIS-II, heme b biosynthesis I (aerobic):
- 4 reactions found over 4 reactions in the full pathway
- PWY0-1415, superpathway of heme b biosynthesis from uroporphyrinogen-III:
- 5 reactions found over n.a reactions in the full pathway
- HEMESYN2-PWY, heme b biosynthesis II (oxygen-independent):
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
