Difference between revisions of "1.3.99.5-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14785 RXN-14785] == * direction: ** left-to-right * common-name: ** acyl-coa oxidase ** fatty a...")
(Created page with "Category:reaction == Reaction PSERPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** l-3-phosphoserine phosphatase * ec-number: ** [http://enzyme.expasy.org/EC...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14785 RXN-14785] ==
+
== Reaction PSERPHOSPHA-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** acyl-coa oxidase
+
** l-3-phosphoserine phosphatase
−
** fatty acyl-coa oxidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/3.1.3.3 ec-3.1.3.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15651]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-15675]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[Phosphoserines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Serines]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19669]]
+
* Gene: [[SJ09777]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03090]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ07452]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ07451]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13468]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 31: Line 16:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7338]], 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7338 PWY-7338]
 
−
** '''6''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q58989 Q58989]
 +
** [http://www.uniprot.org/uniprot/O25367 O25367]
 +
** [http://www.uniprot.org/uniprot/Q9JUR1 Q9JUR1]
 +
** [http://www.uniprot.org/uniprot/Q9CHW3 Q9CHW3]
 +
** [http://www.uniprot.org/uniprot/Q9PIL4 Q9PIL4]
 +
** [http://www.uniprot.org/uniprot/P44997 P44997]
 +
** [http://www.uniprot.org/uniprot/P0AGB0 P0AGB0]
 +
** [http://www.uniprot.org/uniprot/P42941 P42941]
 +
** [http://www.uniprot.org/uniprot/Q49823 Q49823]
 +
** [http://www.uniprot.org/uniprot/O82796 O82796]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=fatty acyl-coa oxidase|acyl-coa oxidase}}
+
{{#set: common-name=l-3-phosphoserine phosphatase}}
−
{{#set: ec-number=ec-1.3.3.6}}
+
{{#set: ec-number=ec-3.1.3.3}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:39, 18 December 2020

Reaction PSERPHOSPHA-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-3-phosphoserine phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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