Difference between revisions of "1.3.99.5-RXN"

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(Created page with "Category:reaction == Reaction PSERPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** l-3-phosphoserine phosphatase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction IVCDH == * direction: ** left-to-right * common-name: ** isovaleryl-coa dehydrogenase == Reaction formula == * 1.0 FAD[m] '''+''' 1.0 I...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PSERPHOSPHA-RXN ==
+
== Reaction IVCDH ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-3-phosphoserine phosphatase
+
** isovaleryl-coa dehydrogenase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.1.3.3 ec-3.1.3.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PROTON]][c] '''+''' 1 [[Phosphoserines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Serines]][c]
+
* 1.0 [[FAD]][m] '''+''' 1.0 [[ISOVALERYL-COA]][m] '''=>''' 1.0 [[3-METHYL-CROTONYL-COA]][m] '''+''' 1.0 [[FADH2]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09777]]
+
* Gene: [[SJ07241]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q58989 Q58989]
 
−
** [http://www.uniprot.org/uniprot/O25367 O25367]
 
−
** [http://www.uniprot.org/uniprot/Q9JUR1 Q9JUR1]
 
−
** [http://www.uniprot.org/uniprot/Q9CHW3 Q9CHW3]
 
−
** [http://www.uniprot.org/uniprot/Q9PIL4 Q9PIL4]
 
−
** [http://www.uniprot.org/uniprot/P44997 P44997]
 
−
** [http://www.uniprot.org/uniprot/P0AGB0 P0AGB0]
 
−
** [http://www.uniprot.org/uniprot/P42941 P42941]
 
−
** [http://www.uniprot.org/uniprot/Q49823 Q49823]
 
−
** [http://www.uniprot.org/uniprot/O82796 O82796]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-3-phosphoserine phosphatase}}
+
{{#set: common-name=isovaleryl-coa dehydrogenase}}
−
{{#set: ec-number=ec-3.1.3.3}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 15:01, 5 January 2021

Reaction IVCDH

  • direction:
    • left-to-right
  • common-name:
    • isovaleryl-coa dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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