Difference between revisions of "1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44."

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(Created page with "Category:reaction == Reaction RXN-3521 == * direction: ** left-to-right * common-name: ** l-ascorbate peroxidase * synonymous: ** ascorbic acid peroxidase ** l-ascorbic ac...")
(Created page with "Category:reaction == Reaction 1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44. == * direction: ** left-to-right == Reaction formula == * 1.0 METHYLENE-THF[...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-3521 ==
+
== Reaction 1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44. ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** l-ascorbate peroxidase
 
−
* synonymous:
 
−
** ascorbic acid peroxidase
 
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** l-ascorbic acid-specific peroxidase
 
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** l-ascorbic acid peroxidase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CPD-318]][c] '''+''' 2 [[WATER]][c]
+
* 1.0 [[METHYLENE-THF]][c] '''+''' 1.0 [[NADH]][c] '''+''' 1.0 [[PROTON]][c] '''=>''' 1.0 [[5-METHYL-THF]][c] '''+''' 1.0 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04585]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ14435]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ17253]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ16420]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2261]], ascorbate glutathione cycle:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* METANETX-RXN : MNXR139712
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R09540 R09540]
 
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30266 30266]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P48534 P48534]
 
−
** [http://www.uniprot.org/uniprot/Q7M287 Q7M287]
 
−
** [http://www.uniprot.org/uniprot/O49159 O49159]
 
−
** [http://www.uniprot.org/uniprot/Q7M3G0 Q7M3G0]
 
−
** [http://www.uniprot.org/uniprot/Q05431 Q05431]
 
−
** [http://www.uniprot.org/uniprot/Q43824 Q43824]
 
−
** [http://www.uniprot.org/uniprot/Q41772 Q41772]
 
−
** [http://www.uniprot.org/uniprot/Q41371 Q41371]
 
−
** [http://www.uniprot.org/uniprot/Q42661 Q42661]
 
−
** [http://www.uniprot.org/uniprot/Q42564 Q42564]
 
−
** [http://www.uniprot.org/uniprot/O46921 O46921]
 
−
** [http://www.uniprot.org/uniprot/P93404 P93404]
 
−
** [http://www.uniprot.org/uniprot/Q9FE01 Q9FE01]
 
−
** [http://www.uniprot.org/uniprot/O65634 O65634]
 
−
** [http://www.uniprot.org/uniprot/Q39843 Q39843]
 
−
** [http://www.uniprot.org/uniprot/O49122 O49122]
 
−
** [http://www.uniprot.org/uniprot/O49822 O49822]
 
−
** [http://www.uniprot.org/uniprot/Q42459 Q42459]
 
−
** [http://www.uniprot.org/uniprot/Q39780 Q39780]
 
−
** [http://www.uniprot.org/uniprot/Q96399 Q96399]
 
−
** [http://www.uniprot.org/uniprot/O81333 O81333]
 
−
** [http://www.uniprot.org/uniprot/O81603 O81603]
 
−
** [http://www.uniprot.org/uniprot/O81604 O81604]
 
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** [http://www.uniprot.org/uniprot/Q42909 Q42909]
 
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** [http://www.uniprot.org/uniprot/Q9STM9 Q9STM9]
 
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</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-ascorbate peroxidase}}
+
{{#set: nb gene associated=0}}
−
{{#set: synonymous=ascorbic acid peroxidase|l-ascorbic acid peroxidase|l-ascorbic acid-specific peroxidase}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=4}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:21, 18 March 2021

Reaction 1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44.&oldid=141589"