Difference between revisions of "1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44."
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] == * direction: ** reversible * common-name: ** 2,3-dehydroadipyl-coa hydratase...") |
(Created page with "Category:reaction == Reaction AMINOCYL-TRNA-HYDROLASE-RXN == * direction: ** left-to-right * common-name: ** peptidyl-trna hydrolase ** aminoacyl-trna hydrolase * ec-numbe...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction AMINOCYL-TRNA-HYDROLASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** peptidyl-trna hydrolase |
− | ** | + | ** aminoacyl-trna hydrolase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[N-Substituted-Aminoacyl-tRNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-Substituted-Amino-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNAs]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * Gene: [[ | + | * Gene: [[SJ05960]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ02121]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ03879]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ09079]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | + | * Gene: [[SJ00680]] | |
− | |||
− | |||
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
− | |||
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | |||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | |||
− | |||
− | |||
</div> | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | |||
− | |||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
− | * | + | * UNIPROT: |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/Q9JV42 Q9JV42] |
− | * | + | ** [http://www.uniprot.org/uniprot/P44682 P44682] |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/Q9PII7 Q9PII7] |
− | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/Q9CJI1 Q9CJI1] |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P0A7D1 P0A7D1] |
− | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/Q59989 Q59989] |
− | {{#set: nb gene associated= | + | {{#set: direction=left-to-right}} |
− | {{#set: nb pathway associated= | + | {{#set: common-name=peptidyl-trna hydrolase|aminoacyl-trna hydrolase}} |
+ | {{#set: ec-number=ec-3.1.1.29}} | ||
+ | {{#set: nb gene associated=5}} | ||
+ | {{#set: nb pathway associated=0}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 20:42, 18 December 2020
Contents
Reaction AMINOCYL-TRNA-HYDROLASE-RXN
- direction:
- left-to-right
- common-name:
- peptidyl-trna hydrolase
- aminoacyl-trna hydrolase
- ec-number:
Reaction formula
- 1 N-Substituted-Aminoacyl-tRNA[c] + 1 WATER[c] => 1 N-Substituted-Amino-Acids[c] + 1 PROTON[c] + 1 tRNAs[c]
Gene(s) associated with this reaction
- Gene: SJ05960
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ02121
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03879
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ09079
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ00680
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links