Difference between revisions of "1.5.99.12-RXN"

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(Created page with "Category:reaction == Reaction RXN-10036 == * direction: ** left-to-right * common-name: ** phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase ** pi(3,4,5)p3 5-phosphat...")
(Created page with "Category:reaction == Reaction RXN-17105 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.19 ec-1.14.19] == Reaction formula == * 1 CPD-...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-10036 ==
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== Reaction RXN-17105 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
 
−
** pi(3,4,5)p3 5-phosphatase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.86 ec-3.1.3.86]
+
** [http://enzyme.expasy.org/EC/1.14.19 ec-1.14.19]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-12646]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-14407]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ05163]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ11565]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ20267]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6368]], 3-phosphoinositide degradation:
+
* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals):
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** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R09827 R09827]
 
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25531 25531]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=pi(3,4,5)p3 5-phosphatase|phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase}}
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{{#set: ec-number=ec-1.14.19}}
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{{#set: ec-number=ec-3.1.3.86}}
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{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 19:04, 14 January 2021

Reaction RXN-17105

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=1.5.99.12-RXN&oldid=102909"