Difference between revisions of "1.5.99.12-RXN"

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(Created page with "Category:reaction == Reaction MANNPISOM-RXN == * direction: ** reversible * common-name: ** mannose-6-phosphate isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.3....")
(Created page with "Category:reaction == Reaction 1.5.99.12-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.5.99.12 ec-1.5.99.12] == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction MANNPISOM-RXN ==
+
== Reaction 1.5.99.12-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
−
* common-name:
 
−
** mannose-6-phosphate isomerase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.1.8 ec-5.3.1.8]
+
** [http://enzyme.expasy.org/EC/1.5.99.12 ec-1.5.99.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15979]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c]
+
* 1 [[Acceptor]][c] '''+''' 1 [[CPD-4209]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ADENINE]][c] '''+''' 1 [[Donor-H2]][c] '''+''' 1 [[PRENAL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* Gene: [[SJ15069]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01610]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ22044]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15067]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3861]], mannitol degradation II:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5659]], GDP-mannose biosynthesis:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7586]], &beta;-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7456]], &beta;-(1,4)-mannan degradation:
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6992]], 1,5-anhydrofructose degradation:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway):
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-3881]], mannitol biosynthesis:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[MANNCAT-PWY]], D-mannose degradation:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR114990
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12359 12359]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13625 13625]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00772 R00772]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05708 R05708]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P07874 P07874]
 
−
** [http://www.uniprot.org/uniprot/P29951 P29951]
 
−
** [http://www.uniprot.org/uniprot/P39841 P39841]
 
−
** [http://www.uniprot.org/uniprot/P00946 P00946]
 
−
** [http://www.uniprot.org/uniprot/P25081 P25081]
 
−
** [http://www.uniprot.org/uniprot/Q52206 Q52206]
 
−
** [http://www.uniprot.org/uniprot/P34949 P34949]
 
−
** [http://www.uniprot.org/uniprot/P29952 P29952]
 
−
** [http://www.uniprot.org/uniprot/P34948 P34948]
 
−
** [http://www.uniprot.org/uniprot/Q55183 Q55183]
 
−
** [http://www.uniprot.org/uniprot/P73377 P73377]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=mannose-6-phosphate isomerase}}
+
{{#set: ec-number=ec-1.5.99.12}}
−
{{#set: ec-number=ec-5.3.1.8}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=8}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:22, 18 March 2021

Reaction 1.5.99.12-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR114990
  • RHEA:
  • LIGAND-RXN:





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